Do you think I would've done any damage with it running lean?
Also do you mean remove the jets and needles with out removing the carb from the bike? Ive never opened up a carb before so not really sure what im doing.
The rubber boots appear to be on properly. But I noticed a bolt had fully come out (see photo attached, the bolt above the chain) I didnt lose it because it couldnt get past the chain. Couldve that casued use any air leaks or cause any other problems?
Running lean in deep sand for long periods can do damage but it's still running.Tough engines.
Hamiltons jetting recommendation is a good place to start.You will be surprised how much better it will be.Opening the carb is easy,just be patient,keep every thing clean & don't brute force it!( no hammer required).Plenty of instruction info on this forum ,but briefly-
Start with a clean,dry bike.
Loosen the rubber boots each side of the carb.
Disconnect the fuel hose.Keep rags handy,there will be fuel leakage.
Rotate the carb top towards you enough to unscrew the top.Jiggle the throttle cable to get enough slack.Carefully pull the carb top off,it will have attached a long spring,a slider & the needle sits in the slider.(tricky bit)Push the spring up to the cap,the cable end sits in a slot in the slider.Push the cable down & sideways to unhook.Slider will now be separate from the spring/cable.Put a socket in the top of the slider (5mm I think?),undo this & tip the slider up for the needle to fall out.Note what numbers/letters are on the needle & which slot the little circlip is in.Tip-take photos as you go.
Put a bit of clean rag in the top of the carb & rotate it away from you.You may need to remove the 17mm bolt at the bottom.Rotate it enough to undo the 4 screws that hold the bottom of the carb (bowl) on & remove.
Remove the main jet gently (brass hexagonal thing with a hole in the middle-6mm socket).
Remove pilot jet (brass screw with a hole through it, set deep in a hole,need a slot/spade screwdriver)make sure it is a good fit as you don't want to damage this & not all screwdriver have a thick enough end with a narrow shaft to fit.
Note numbers on each & post it up.
Have a beer,smell the fuel fumes in your garage -you just earned a new man badge.